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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015944920.1_cds_XP_016487619.1_78333
CDS Infomation

[gene=LOC107807697] [db_xref=GeneID:107807697] [protein=casein kinase I-like] [protein_id=XP_016487619.1] [location=join(28187..28262,28407..28447,32063..32132,32278..32426,32522..32617,33125..33195,35602..35663,35763..35826,35943..36027,36289..36415,36539..36612,36709..36772,36983..37116,37322..37588)] [gbkey=CDS]
Sequence

ATGGATCATGTTGTGGGTGGGAAGTTTAAGCTGGGAAGGAAGATCGGAAGTGGGTCTTTT
GGTGAGCTTTATTTAGGTGTGAATATACAGAATGGAGAAGAAGTTGCCATTAAGCTGGAA
TCTGTCAAGACAAAGCACCCTCAATTGCACTATGAATCAAAAATATATATGCTTCTTTCA
GGAGGAACTGGAATTCCCAATCTTAAATGGTTTGGAGTCGAAGGTGAGTACAATGTAATG
GTCATAGACCTTCTTGGACCGAGCTTGGAAGACCTCTTCAACTATTGCAATCGGAAACTT
TCATTGAAAACAGTTTTGATGCTTGCGGATCAGCTAATTAATAGAGTTGAATACATGCAC
TCAAGAGGATTTCTTCACCGTGACATAAAGCCAGACAACTTCCTAATGGGCCTTGGTCGC
AAAGCAAATCAGGTGTACGCCATCGACTTCGGGCTTGCCAAAAAGTATAGGGACCTGCAG
ACTCACAAGCATATACCGTACAGGGAAAACAAGAATCTGACAGGCACAGCTCGCTATGCC
AGTGTCAACACACACCTTGGAGTTGAGCAAAGCAGAAGAGATGATTTGGAATCTCTGGGT
TATGTGCTTATGTATTTTCTTAGAGGAAGTCTTCCGTGGCAGGGATTGAAAGCTGGTACT
AAGAAGCAGAAATATGATAAAATCAGTGAGAAGAAGATGTTGACTCCAATAGAGGTGCTA
TGTAAATCATATCCGTCAGAGTTCATATCATACTTCCATTATTGTCGGTCGTTACGGTTT
GAAGATAAACCTGACTATTCATATCTGAAGAGGCTTTTCAGGGACTTGTTTATTCGTGAA
GGTTATCAGTTTGACTATGTGTTTGATTGGACCATTTTGAAGTATCCTCAGATTGGTGCC
AGTTCTAGAGGACGTAATATTAGTGGAAGTGCGGCACTAAATGCTGGGCCATCTGCTGAA
AGACCGGGAAGGGCATCAGTGGGACAGGATATCCGAGACAGGTTTTCTGGTGCTGTTGGA
GCATTTACGCGGAGGAATGCTTCTGGTTCTGGCAGGCATGACGAATACTCAAGACACAAG
ACTTCAGATGATATACCTTCATCCAAAGATGTGCAATTTGATTCAGAAAGAGGCCGTACA
TCAAGAAATGGTAGCTCATCCAGAAGGGCTGCCATTTCAAGTAGCAGACCGAGCTCTTCT
GGTGAACCTACTGATAGTCGCTCAAGCAGATTAGTGTCGAGCAGTGGCCGCTTATCTTCC
ACACAAAGGGTTCATTCTGGAGTCGAACCAAAACCATCATTGTTTTCCCGAACTTCACTT
GCAAAGGGCAGCCGTGATGACCCTCTTCGGAGCTTTGAGCTTCTTTCAATCAGAAAGTAA

Peptide Sequence

PEP ID

XP_016487619.1
PEP Infomation

PREDICTED: casein kinase I-like [Nicotiana tabacum]
Sequence

MDHVVGGKFKLGRKIGSGSFGELYLGVNIQNGEEVAIKLESVKTKHPQLHYESKIYMLLS
GGTGIPNLKWFGVEGEYNVMVIDLLGPSLEDLFNYCNRKLSLKTVLMLADQLINRVEYMH
SRGFLHRDIKPDNFLMGLGRKANQVYAIDFGLAKKYRDLQTHKHIPYRENKNLTGTARYA
SVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKMLTPIEVL
CKSYPSEFISYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGA
SSRGRNISGSAALNAGPSAERPGRASVGQDIRDRFSGAVGAFTRRNASGSGRHDEYSRHK
TSDDIPSSKDVQFDSERGRTSRNGSSSRRAAISSSRPSSSGEPTDSRSSRLVSSSGRLSS
TQRVHSGVEPKPSLFSRTSLAKGSRDDPLRSFELLSIRK

Transcript Sequence

Gene sequence data has not been registered.